LOCUS BG073130 611 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118H10 3', mRNA sequence. ACCESSION BG073130 VERSION BG073130.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 611) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073130.1. Other_ESTs: H3118H10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3118 row: H column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..611 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118H10-3" /db_xref="taxon:10090" /clone="H3118H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 113 c 120 g 179 t ORIGIN 1 ctctttcaaa gttgattgtt tgcatttatt ttctacatac atagaaatat gactaacaca 61 tatagttagt tagatgccca aaaagtactt taacttctag agtattggtt accatggctt 121 tctgcttgga aaggcctccc aatgacagtt ttcacaggta tccacagaag aacaaatatt 181 tgtttatccc aaagtcctca catttgtatg ctatgtgtac tttgtaaact ttcctgttta 241 gcacaacatt tcatctctct agatacaata taaaaatgca ggtacagtaa gactgtgaat 301 aagaaaggca gttatggtaa acactagtca gtgggactga actactggtc agaagaatca 361 ctggtacatg tcagactgat gtgttatttg gtccctttac aacactcaaa gcagggatca 421 aaaattctac taataccggt tgcagaagag catccttttg aatgcatctc tgagctctgg 481 gctccgaaag gcatatataa aggggtcaat aactgcattg cacatgatca acatgccatt 541 gacctggaag agagacatgt agcaaacaca gtaagggtta tttgggcaga aggtcattaa 601 gagaacatgg a //