LOCUS BG072973 652 bp mRNA linear EST 12-MAY-2010 DEFINITION H3117B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3117B06 3', mRNA sequence. ACCESSION BG072973 VERSION BG072973.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 652) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072973.1. Other_ESTs: H3117B06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3117 row: B column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..652 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3117B06-3" /db_xref="taxon:10090" /clone="H3117B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 204 a 111 c 118 g 219 t ORIGIN 1 cagggaaaaa ttgagattaa cttatttttc ttaaaaggtt catctcaagg atggcaacaa 61 agtccagctt gtgccgccaa acggttttac atgatcaaac cgagtacagc ttctttgtgt 121 gaactgttga ctacaaacat ttaccaaata cataaatctc ttttaaaaaa gccattttaa 181 atatagcaaa gcagtgtctt cttgcacagc aaagtggaga aagtttctac agagaaataa 241 aagttttaca tttgtaaagt tcttttcaca ttctaatcat ctagcttttt atgatccaat 301 gccaggagtt ttcaggttcc gtatttacta tgtatttctt gtgcgcatga tggttaatac 361 agaaattatg ttaatacatt agtcgtcttt acagttgaaa ggaaatggtg aaacatgtat 421 tgttctttta gaacaaaccc ctgatttagt tttgtaacac aatggatgta attagggctc 481 aaaggatgga gttttgactg ggaccacctg tgttgacaca gcggtgacac tcactctcag 541 tatagaacca cttagagtcc tgagggaact tcccatgtcc agtgcaactt aagctttttt 601 tgtttttctt tttaataata aaatatgtta tctgaaggga gaaaactttc ct //