LOCUS BG072873 580 bp mRNA linear EST 12-MAY-2010 DEFINITION H3116A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3116A03 3', mRNA sequence. ACCESSION BG072873 VERSION BG072873.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 580) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072873.1. Other_ESTs: H3116A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3116 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..580 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3116A03-3" /db_xref="taxon:10090" /clone="H3116A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 124 a 146 c 154 g 156 t ORIGIN 1 gagtggcagc agtgaggttt attggagcat cctaatacag acgctggggc ttgcccatgg 61 tgctcttgat gtacagagcc cgcacgtttt gccagttttt cttaagcaag gacaccaaga 121 aattgacagc cagatgaatg ttgtagacta gctcatcatc ggtcatcttc acgtggccaa 181 cagcgacggc caaacacagc accttcttca tctggaactt gattgtcgat ttcacctcat 241 ccactttggc caccatgttt tcattgtgtg tcagcaggga ggggaacttg ccagccttgt 301 ttaggcctgg gcccaggata cgtgggatct gcttaatcag agactcagag gccaaaaagg 361 catcgtactt cttagccagc ttcttgacca acttcttgtt tttgttaagc ttcttgagcg 421 cctcgatgtc catgtggggg atatccacgg ccttggcttc atcacagtgc tgctggtccc 481 ccagaacgca caccgagaac ttggggcgtg gggtggactt gagcctgacg gtgcccgaga 541 aacgtttgtc cttctgaggg tcgtagttct tcaggctgat //