LOCUS BG072803 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115B09 3', mRNA sequence. ACCESSION BG072803 VERSION BG072803.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072803.1. Other_ESTs: H3115B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115B09-3" /db_xref="taxon:10090" /clone="H3115B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 160 a 187 c 143 g 207 t ORIGIN 1 gcgatcggat cttttatttt ccagtcagcc aacagtttta gacttagggc tttcttccct 61 tcttacgcag tgactgtcct tctccagaga aagcaatgaa tctgcctcca gcttcatcct 121 cttcaacctt tttgaccaat ggacgtgaat ttctgatgaa agtgatctta ccaagcttaa 181 attcgtaatt aggaattcct cttttgatgt ctccaggctt gattggggag ggactgggct 241 caaccccttt tttcttccca tccagtctat tcccagaacc agagaaggca cggaagccca 301 cctccccggc atagccactg tggtcagctt ctccctctat tgactcctca tgctgcactg 361 gtctttctgg ttctttgtat cccaagggag catcaaaatc cacattcatg tcacattcaa 421 taatggatac agccttgtca ggtttggtct ccatcacccg cagctcatag atcttctcat 481 tgtagttgat agcaatcaca tctccagtcg tcagacaggc gaagtttctc aatgcatttt 541 ctaataccgc tttagggttg gtaatatcca ggaagtctgg gctctgaggc tggaacttag 601 agtaggtcgc cacttggagg ttgacacttt ccacctgaac caggccccct tcctccaaca 661 gcaaattctg catcatccag tgggggaggt acagatg //