LOCUS BG072779 772 bp mRNA linear EST 12-MAY-2010
DEFINITION H3114H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3114H03 3', mRNA sequence.
ACCESSION BG072779
VERSION BG072779.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 772)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072779.1.
Other_ESTs: H3114H03-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3114 row: H column: 03
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..772
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3114H03-3"
/db_xref="taxon:10090"
/clone="H3114H03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 171 a 217 c 178 g 206 t
ORIGIN
1 caatgttcag ttttctttaa tgacccccat ctcccttgaa gggtaggtgc aggcagctag
61 gcgactggca agacttgttc acttgaagat cttgccttga ttgacggctt tgcccacatg
121 ctggaaggtc ccctcccagg aaaagtactc tcgaaccagg gtctgggttt cctcgctccc
181 aggatccagt ttccgccatg tatacgactc atagtccacc tgccaatctg gactcagcgg
241 aaaggcaagc tcttggcctc ggaagaccca aacaccagaa atggagctgc tgttgttggt
301 tccaaagagg ataacactag caaaggcatt cttcctcagt ttgtccaatc gctgaaacat
361 cccagtgatg aggttgcaac tcatgaaggt ctgggtcagc tcttcaggga agcggtactc
421 ggcataccac agggaccagc catctttatc aaagtgctcc caaaaatatg gcagtgccac
481 agagagggtg tcctcattgg agtacttacg cttaaactca tccaacacaa aggtactctt
541 gggcaggtga gcgaaagggt ccttggcctt gggctcagca gccaatgcct gctcacactc
601 atccatctct tcctcaggag ctggggcagc tgcctttttt tcctccttcc gctcagcctg
661 gggtttctgt ttctcctctc gtgaaccctt ttctttcctt ggggtatctt ttttaggctg
721 gctctctgca aacttcttag catcaaactg agccatcttc tcacacagct tc
//