LOCUS BG072759 775 bp mRNA linear EST 12-MAY-2010 DEFINITION H3114F04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3114F04 3', mRNA sequence. ACCESSION BG072759 VERSION BG072759.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 775) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072759.1. Other_ESTs: H3114F04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3114 row: F column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..775 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3114F04-3" /db_xref="taxon:10090" /clone="H3114F04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 228 a 185 c 165 g 197 t ORIGIN 1 agtagtcaga catttgatga atgattgatt acaaatacag tttggacagt aaaactctag 61 aacttgctgg taagaacaat ttacattcgt aataagacaa agaaaggaat gctctaaaaa 121 tctgatagca cgtatccttt aaacactaca gacccataac gaaaaggagc cctcccctta 181 actctcatgc aaaccacaat caagtacaag gcaccaaatt ttatgaattg tagaaaatta 241 gttcacaaag ctttatcagt aaaacaaata tcagatatcc tcccaccccc cgcccccaaa 301 gttttcattc ttcaccatgg acctctcggc ttactcgggc actgccggcc agtccacctc 361 attggttcgt cccctgaatg tggatggagc tgaaggcata gccagagcag ggacctcata 421 caatcatgga ctcgagaggc cttgccactg tgaacaaaaa taaactctgc tattgagtcc 481 ataggacaca ttaactcttc tacagtttcc agtcttattc ttgacgtttt aagagacatc 541 taaaagttct tcactatgtg gcattgccct cccatctcag ccagaggggc tgggttaaag 601 ctggcaagag ctctgcctgc catgggatga gagctacagt tcctggtgcc aaggctagcc 661 ctgctggttt tgcactagta atgggtgctg ctcttagagg cgaccacaag catgagggcc 721 aggctagact gaggtaagaa gtcatttttg agggctgggg tgaattcatc ttggc //