LOCUS BG072742 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3114D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3114D10 3', mRNA sequence. ACCESSION BG072742 VERSION BG072742.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072742.1. Other_ESTs: H3114D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3114 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3114D10-3" /db_xref="taxon:10090" /clone="H3114D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 156 a 172 c 135 g 212 t ORIGIN 1 cacaaatagg actttttatt tgtcactatt aaaaatctgg attttacact gattcttgga 61 ctggcggttc atatccgtca gctcgctcaa ccttagcacc cgtctcgtct ccagctgctt 121 tgccagagct gccgccttcc ccatgcagct ccatgagctt gcccaattca aacttgggtt 181 tcttcagcat ttttactttt ctaacaaaga cgtcatggag aggataaatg gactggcaag 241 ccttttctat gtctttccca atgctgtctg gaatcagttt attaactact tccttcaagt 301 cattagtctg cacctctcgg gtcatgattt ccatcatctt cttccggatc tggcggactt 361 gctggtgctg cgcataggat gtctttctta tctggttgtt gcgtttctta gtgaagccaa 421 cacagaaaag tcggagcaaa tacccatcgg tcgtcttgac atcaacgtga gcttcgatca 481 tggtctgcca cttcttgacc atggagcaca ttttgtcccg ggtaagatcc ataccatgga 541 agttagtcag acagtttttg ccctgaacgt cctcagtgat tagcttgaat tttctaaacg 601 caacttcatc attctgtaga tcagcaaggc tcacttcaaa cacacgaccc ttgaggccat 661 cagaggcaat tttgg //