LOCUS BG072628 575 bp mRNA linear EST 12-MAY-2010 DEFINITION H3113B01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3113B01 3', mRNA sequence. ACCESSION BG072628 VERSION BG072628.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 575) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072628.1. Other_ESTs: H3113B01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3113 row: B column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..575 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3113B01-3" /db_xref="taxon:10090" /clone="H3113B01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 130 c 159 g 123 t ORIGIN 1 gtattggatt ttatttataa acaaacggac acaaaatagt tcagatggca gtgggggcag 61 cagtgctgct gacttgctta ggaggaaagc acaggagcta gcagagggca gaactcctcc 121 agccttgagg tcctcctccc accattgggg ccccgtgacc taattgcatt aggccccatc 181 ttttgcagca attctgacca gggcagggag ctgtgggggc agggagaggg gaaactccat 241 cagagatgaa gactggggct acaaaggacc cagtgtagga agagagaccc tcaccttttg 301 ctcagtgagc caaatacttt gtccattcca gagaagaagt gccctagggc agtgtcttct 361 gaaataggcc acacttctct ggagaggccc tctctggacc agaggatggt ctccctcttc 421 caaaaaactg tttggtgcaa gagaagcatt aagtccaaac gccagaagca ataaattagc 481 aataagaaag gatctcttta aaaaaggtct gcaccataag ttcagagtct ggggatccag 541 tgagaaggca tgagctgggg gccttgggac actat //