LOCUS BG072497 730 bp mRNA linear EST 12-MAY-2010
DEFINITION H3111C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3111C10 3', mRNA sequence.
ACCESSION BG072497
VERSION BG072497.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 730)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072497.1.
Other_ESTs: H3111C10-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3111 row: C column: 10
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..730
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3111C10-3"
/db_xref="taxon:10090"
/clone="H3111C10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 182 a 195 c 121 g 232 t
ORIGIN
1 cctttttctt ttgtcgttga gattttctac ttttatttta tgagtatggc tattctgcct
61 gcatgtatct gtgaagcact ttcacgcctg gagcccacag aggatggtac tggatctatt
121 gggactagag tgagaggtag ctgggagttg ccacatcagt actgaatttg aatccagctc
181 ttctgtaata actgccagtg ctctaactgc tgaaccatct ccccagcccc ttcttacctt
241 attcttttaa agtactcaga atctcgactt agggaaggaa ggaaggcact gtagagaata
301 catgtgaatc tttgattatg aactggctgg ttctcactac ttctcgctgt gggcccttac
361 aaacagccat gttaaaatcc caagctatct cacactatag attgttttct atgctatagc
421 cacctatacc tattcttcct tcttcaacat tgctgtccca atccttgaca atttcaatac
481 ccaactggat actggggctt tgagctccct ctggtgtgaa aataaaagtt cctagcaact
541 ttgctcttag aatttttcct gttcttccac ctcatttaat tctccccctg ccaatactca
601 atgcaagcca gtcacacaag cattaccttg cacacctccc aactctcttt cacctacaca
661 atgacaagta ctcttgcttc ccagtagccg ttcctctaca caaagcaaag caactcacct
721 gaacctttct
//