LOCUS BG072490 702 bp mRNA linear EST 12-MAY-2010
DEFINITION H3111B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3111B09 3', mRNA sequence.
ACCESSION BG072490
VERSION BG072490.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 702)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072490.1.
Other_ESTs: H3111B09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3111 row: B column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..702
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3111B09-3"
/db_xref="taxon:10090"
/clone="H3111B09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 223 a 137 c 145 g 197 t
ORIGIN
1 ctttcaaaat attttattcc aagtagaaat tcatacaggg tggtgtgtgt gggaagatgg
61 attccagaaa gataattagg gagaagtttg aggagcagag tccttgggtt atcaaaataa
121 taaaattcaa aataatctta cataagaaac tttaacagta tcatttcatg caaataacaa
181 gaccaggctg gtcaccaagt aataagaatt aacccttaca acatatacac ttaaacacac
241 agttctcaga aacagctatt ttatctccta aagagatcat atcttcttac ttcttttttt
301 tttccaaaga tttatttatg ttatttatat aagcacactg tagctgtctt cagatacacc
361 agaagagggc atcagatctc attacggatg gttgggagcc accatgtggt tgctgagaat
421 tgaactcagg acctctggaa gagcagtcag tgctcttaac tgctgagcca tctctccagc
481 cctgcaaatg aactcttaaa atgggagtta acgtctacat tgtttttacg aagggagaat
541 cactagaaaa tgggtctctg gacaagagag gggtggtgag gtttagggag gagtcatttt
601 cagagcagca gtgagctcca tccggaggcc ttcttcctga gaacaccttc ccatcaggca
661 cctttcctca aaagtacgca tgagcacatg tgtgcacaca ca
//