LOCUS BG072448 697 bp mRNA linear EST 12-MAY-2010
DEFINITION H3110F05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3110F05 3', mRNA sequence.
ACCESSION BG072448
VERSION BG072448.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 697)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072448.1.
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3110 row: F column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..697
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3110F05-3"
/db_xref="taxon:10090"
/clone="H3110F05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 215 a 166 c 119 g 197 t
ORIGIN
1 aatcttccta atgaaaatct tatcttcaag gtgagaattc tggatctaaa atacctaata
61 aggataccaa gcagaataat ctgccaagat aaaaacatcc tccactgctt ttgttgtttt
121 ccctctctta tttatatgca gatttggaag ccacctggtt tacaggatgt gtcttttagg
181 cttaaaagcg taagtgaaac aaaaatatct aatgcatgct gtcagccaaa gcccatgaga
241 agtcatcgag acttgagaat catcagcgca tgggacttga ttctccggga gtatagaaca
301 aaatagcctc caatgtagct acgacccttg cagtttctca acactgagca aaaagatgct
361 tcattaacat gaaagtgttt tctcaaaggc aatcacgtgc agttacctga gcctcagttt
421 cttattagta caggcccacc gaagcccctt tccgccctac acccatataa tggctgtgga
481 aatgacaaag acggtctact gcctggcacc agttccaaac tgatccaata aatgtgtaac
541 atcaaagcca tatcagtatc cactccagaa acgcacagcc tccgtccagc cttccgctca
601 ctgtgcccca caaattataa tggaaaggtc cctcctaacc ctaagtcttt taaaaatttg
661 ttattatttt ttaaattagt atctgatttg attcctg
//