LOCUS BG072445 754 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110F02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110F02 3', mRNA sequence. ACCESSION BG072445 VERSION BG072445.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 754) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072445.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: F column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..754 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110F02-3" /db_xref="taxon:10090" /clone="H3110F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 224 c 180 g 178 t ORIGIN 1 aaccttaagc tttatttaaa taacctcagt gagaacccag cagaccagca accatcttct 61 catccacccc ctcacctcac aaggaggtgc agaccgcctc gcctctcagt ggaagcgggc 121 ttggcctctg ccacggccag ctgatggagc tggaggatcc acagtggagc gggggttctt 181 gatagtctca tccacggaca caataaggca tgcagcctca gaagctgctg tcagagcgtt 241 gatgcgcacc atggctggct cccacacaaa tgcctggaag ttgtcggcga tgttctcatt 301 gttgatgtcc accccatacc acatacctcc ctgtgcgtgt cgagcccgca gcttgttgag 361 gatgtttgtg gcatcaaagc cagcgttgtc acatagctgt cgtggaataa tctccagggc 421 cttggcatat gccccaatca acagctgctg cttcccagga atggtcctcg agtaatcccg 481 caggtatttg gaaagttcca tctcgatggc tccaccacca gccaccacag agtcattctt 541 gatggccctc ctcacaatca tgatggcatc atgtagggac ctctctgtct cttccataaa 601 ctgctcagcg ccaccacgga ggatgatggt acatgtcttg gccttagggc agccagtgaa 661 gaaattgtac ctctctcctc caatttgggt ctcttcaaac acttggcagt ggcccagcac 721 atctggaacc agagcattca cactggtctg gatt //