LOCUS BG072415 685 bp mRNA linear EST 12-MAY-2010
DEFINITION H3110C05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3110C05 3', mRNA sequence.
ACCESSION BG072415
VERSION BG072415.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 685)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072415.1.
Other_ESTs: H3110C05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3110 row: C column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..685
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3110C05-3"
/db_xref="taxon:10090"
/clone="H3110C05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 248 a 127 c 119 g 191 t
ORIGIN
1 agaaactttt ttgaaattta tttctaaata tcacaaactt ttaaaaaagc aacacattca
61 tactaaaata cgtgcatgag caaaagtaaa aaagaagcac aggagtacga aaattaacat
121 aataaaattt taatagtgtt ctggatacaa ggagaatagc actaggtaac ggactgtagt
181 tacctcagca gtctgggagt aggggctgag atcaaccaag gtctagaata gccacttcac
241 atttcatcag tgccgaccaa agcaaaagca agctaaggat ggaaactaca actacccttc
301 caggtaaatc agtcatttta aggtgattta ccctcactca atggcagttg aggtaagtca
361 aacagaaagc ccttacaaag actaagaatc caatgaaaac ttgtttctag cctttgtttt
421 aggtcacctt aagtttaatt tgctttcctg tacttgttaa cattcatgta cacagccttt
481 caggccaagg ttttagcttg ggaatctggc caattgtatg tccaacttca gaacattccc
541 aatcagacaa acttactgta taaaacagta aggtttattt cttaaaagtt gtctgttccc
601 ttaaaattca gtagggccac aggcattaac tggaaggaac acttactaaa taatattaga
661 aagccttaat caaagataat ggata
//