LOCUS BG072398 834 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110A12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110A12 3', mRNA sequence. ACCESSION BG072398 VERSION BG072398.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 834) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072398.1. Other_ESTs: H3110A12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: A column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..834 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110A12-3" /db_xref="taxon:10090" /clone="H3110A12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 294 a 180 c 146 g 214 t ORIGIN 1 ccgagggaaa ataagttttt aatatgttct ttcctccata gcagcaagct cctaccaagc 61 ttttcttagt gcaaatcctg taggcttgtg tcacatacag tacacagaac aacacatcac 121 accaccacag atgcttccga gcagagatac tcctcaaaaa tttaaaacta tacaaagatt 181 tctgagcata aggtcctgcc tggagagttc aactagagcg accctcctag ggccgtttca 241 ccgttaattt aaaagtaggg gacaaaaggt gcccagaaag gaaattaaat tccccgcgga 301 gcataaaacc ttgtacaacc catttgcctc caggatctaa tagcaaattt cactccacgt 361 cattgacata taccaaatac agatgcatga agcttgggtc ctactctata ccaaaatacg 421 atatatacac ctcccactgc aaaaggaatc tgatacctag tctttataca aagctgaata 481 ttttcttcct caaaatcaag taaccacaaa gtaaaataaa tggaatattt ttttaaaaaa 541 aaaatcatac agagaaagtt aagttttgag agacagggcc agggtctttc attgtcttct 601 cttacaatgt agatttctca gtagccactg tccccacagg aatgacaatt gatctttaaa 661 aacagagcct ttttaataca gtttatacag cacaagtcca caagtcactt gagaaacaaa 721 caaaatagag atcattatcc taagtcagaa caagtggggg agagagagcc agagaaagga 781 gtgggaagga agtactttaa tgctatctgt ttctattcag gcttggaaca acac //