LOCUS BG072208 756 bp mRNA linear EST 12-MAY-2010 DEFINITION H3108A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3108A03 3', mRNA sequence. ACCESSION BG072208 VERSION BG072208.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 756) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072208.1. Other_ESTs: H3108A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3108 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..756 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3108A03-3" /db_xref="taxon:10090" /clone="H3108A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 160 c 164 g 238 t ORIGIN 1 gttttgtttt tgttttgttt tgttttgttt ttttttacgt atagacatag ggctgttgag 61 accactcagg ggagataatt tgcttttttg agctgacaat ctgcattcag tcctcagaac 121 ggctaacaga tggagagaac aaaaacctta aaagttgtcc tctgaccttc acaggagtgc 181 cacagtgtgt acatacaacc ccctcaacag acacaataat aagagtaaat agatacagtt 241 tttaaaatta aaatgtatag ccagacttca tcagaaatta ataaggtcta agcttctttt 301 aatgccctgg gactgctgta tgccattata gcctttggag gccaggcaga caaatgactg 361 agcttgtctg agtgactata ctatgtaagc tggcaaggtg ttggctgttg gcccctggtg 421 tacctggagg aatttagcac actgaatttc tatgtgttga ggctgccttc agacttactg 481 tgtagctcca agtgactttg accttgtcat tctcctgcct ccaccatgca actactgggc 541 ttacaggaat gcaccacctt acctgactct tcaatttcta cattcttgat gggggtgggg 601 tttttttaga caaggtctca ctgtgtaatt caaggctagc ctgggtcttg cagtgtagac 661 caggctggcc ttaaactcac agagatctgg tgcctctgcc tcacaattgc tgacattaca 721 ggagtgtata accattccca gctcaatttc tagatt //