LOCUS BG072090 633 bp mRNA linear EST 12-MAY-2010 DEFINITION H3106F05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3106F05 3', mRNA sequence. ACCESSION BG072090 VERSION BG072090.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 633) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072090.1. Other_ESTs: H3106F05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3106 row: F column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..633 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3106F05-3" /db_xref="taxon:10090" /clone="H3106F05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 141 a 130 c 120 g 242 t ORIGIN 1 aatggattct gcttggcttg agaaggattt acttcttcta tgacttcatc cacagtaaca 61 aattcatcca aattaaatgt aaataatggt tcctctttcg atttggaact tctatctgta 121 gtacttttag aattcttagt gttctgcaaa gccaatgcct tattgttgct gtcatcccgt 181 ttcatgatgg gaggtttagt ctctgtttcc tgagactgtt ttgttatgtc cttgtaatcc 241 actttagaat ccttgcactg aagggctgag atccttccac tgcaccctct gttagcacca 301 atctgagtgg gtttggattt actgttgctt tctgccaagc ctgatctggt atttttaagc 361 agaccaaatt ccttggctga aactttcttt tcagccttta tttgctctct aagcacaggt 421 tttgggaagg tgctgtgact ttcagttttt gaaggtgtac tttttgcttt aggagaagag 481 accacagtag ccttgatgct tgatttacta ctatatacat ttgatacagt cagcacacta 541 cttttaccag tttcatcagg cttactggtc tgatccactc ctttagttgg gtctgccttg 601 attacagaac tttcaattgg cttttctctt att //