LOCUS BG072056 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3106B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3106B10 3', mRNA sequence. ACCESSION BG072056 VERSION BG072056.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072056.1. Other_ESTs: H3106B10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3106 row: B column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3106B10-3" /db_xref="taxon:10090" /clone="H3106B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 176 c 164 g 164 t ORIGIN 1 caggtttttc ttccttatat tttaaataaa agtacaaaaa ctaatagtaa aagatgcaaa 61 cagagcagta agagtgaaat aaccatacca tggcaggtat cgggtgtctg aaaccttcag 121 ccatagggct gagcaattca caaaccaaat tgacctttgg tctgcaaaca ctcgagtcca 181 tgggagcgag tgggcagacc tctgtgtcgg gggaaggcca cagtcttctc cttcagagac 241 agttttaagg gcaccgtgta gccagtattt aaaaacagca aaacccagcc agctcctccg 301 acaccactgt caagctgcaa ctccaaaagc ttccaggtaa tgtacattcc actggcagct 361 taggggagtc cgccctcgaa gcctcggatt ctcctggtca actgaatgtc tttggggaaa 421 agcgtgaccc gaccagcatg taaggagagg aggtaggcgt cctcaaagag gtggatgagg 481 aaagcttctg ctgcctcctg aagggccaac aaggcctggg cttgccacca aaaatccaca 541 ccacggctga acttctcaca tatttctcta acaaccatgc tgaaaggctt cttcctgaac 601 aagaggtctg tgctcttctg cagggtcttg atttccttaa gccacatgaa tttctgtctt 661 ctgcgcagtg tctgagagcc tacactggag ctctgtc //