LOCUS BG071965 580 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105B10 3', mRNA sequence. ACCESSION BG071965 VERSION BG071965.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 580) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071965.1. Other_ESTs: H3105B10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: B column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..580 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105B10-3" /db_xref="taxon:10090" /clone="H3105B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 205 a 100 c 117 g 158 t ORIGIN 1 aaaacacacc tttaattttg aacatcctat tttccaatta agaacaaata aataattaca 61 taaaaaaaga tacttggttt cagatctgaa agttgacaaa ccaagagaca gtggttaaag 121 gtggcaacca ctggaaaatg gaacaaagga ctagctggta gatttagagt ttaaactaga 181 gtgaggcaga agacatgatg atataaggac acacagtgaa ggatgtatat agacatatag 241 gctacagata tatacattag ttggatccac tgttaaaact agatgcagtt tttaatatac 301 tcctaaattc gacaacttcc gttagcctaa actcagaagc aacaacattc aaatgagtta 361 agctatgtaa aatgagaagt cacaaccttt attgaagagc aagtaaacac ggtaggtatc 421 ctatgtacag gcggcacatg gtgcaactgc atctgcagat gtagcagtct attggagtta 481 tgcctttgtc acggccttag acaaattctg aactagtgta cagttcagct gtgccagcgt 541 gctgatctta gcatgcttag atgctgcata cttgttcttg //