LOCUS BG071805 791 bp mRNA linear EST 12-MAY-2010
DEFINITION H3103D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3103D05 3', mRNA sequence.
ACCESSION BG071805
VERSION BG071805.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 791)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071805.1.
Other_ESTs: H3103D05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3103 row: D column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..791
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3103D05-3"
/db_xref="taxon:10090"
/clone="H3103D05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 268 a 154 c 141 g 228 t
ORIGIN
1 acatttgata actagattta tttaagaaaa ataacttgat aactagattt atttaagaaa
61 aataacaagt atcaagtaca acctttaatc tcttgaattt cacagtaggt attccaaata
121 tttgattttt ggcttatggt aattatataa tttttcaaaa aaaaaccacc acagtggatt
181 taagaccatt catttaataa tttaacttca taaaacatca atactaaatt gtaacattgt
241 aaacatgatt aaaatatatc ataagctact gaagaaagaa aaaagacaac atgatcccaa
301 aacagaacaa ctcttacttc cttggacaca aatatagcaa aattaccgaa atgatactaa
361 cagaacaacc tgttagttag aagataaaca gaagacagtt cttaagggaa gatccatgga
421 aggttacagc tgtaaactca ttagggcctt aaaatattca gtgcagttct gcgtatgctc
481 cgtaatgatc tgtccagtta ttccgaagat ttggcccctt ggatgctgct cctgatggca
541 gcactggaat gacagctttg actcgaactt ttaagggtgc gctgccttca aagctcgatc
601 caggtcttca agaaggtcct gttcatcctc taggcccaca gaaagtcgta tcagtgtgtc
661 attgatcccg agggtagctc tgtccttctc aggcacagag gcatgggtca tgattgctgg
721 aactcagcca gactctcata tcctcccagg ctctctgcca gagtaaacag ctttagattt
781 ttgagggagg c
//