LOCUS BG071797 876 bp mRNA linear EST 12-MAY-2010
DEFINITION H3103B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3103B10 3', mRNA sequence.
ACCESSION BG071797
VERSION BG071797.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 876)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071797.1.
Other_ESTs: H3103B10-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3103 row: B column: 10
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..876
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3103B10-3"
/db_xref="taxon:10090"
/clone="H3103B10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 288 a 136 c 194 g 258 t
ORIGIN
1 gtcggaataa aattcaattt tattttatta cacttgtaat tttattagca aaacaaagca
61 tcaatacaag tttgagtcaa atgttgctat tagttacaag ctgaattaat agtttgcctt
121 ataaaatgaa agactggagt ggggttcagt ggtgtgcagc tgtgatccca gaagtttggg
181 aggcagaagc aggaaggtta aatttgaaac cagcctagag tttttagctt ggaaagagac
241 agacagagac agaaacagag acagagacaa agagagagac agagagaacc ctaaaactac
301 aggatggtga gatgtgtctg agtcttcatt gtttgtgagc agtttgccac gagctgatcc
361 cctgagttgt cccaaattcc ttcttaatgt ggttcatata aaatatactg gggtctcagc
421 agtgggtgac ttgcccatct ccaattgcat agtagaggtg tctgatgttc catgaacctt
481 tgatgaaggt agaagcaaag aaggaagagc ccgaggagtc cgaagatgac aggggctttg
541 gtctttttga ctaaactgct tttgttaatt tgtccaataa agagataaaa ttgtacctga
601 attttacctc ctgatagctt tacacaagag tacaaacttt agtgcataat gaacctgtta
661 gatattttgc atattactgt agtattgagc atctgaaaaa atgcatactg aggggaatat
721 atatctataa aggatttgct aatattctta ggtaacacac ttgtacccag taacacaaga
781 ttattgattc tgaagaaagg agtctgatat ggatcaacaa tctattcaaa tattatgatc
841 gcactctcaa ggaaggattg acttttctga cttgaa
//