LOCUS BG071792 809 bp mRNA linear EST 12-MAY-2010 DEFINITION H3103B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3103B05 3', mRNA sequence. ACCESSION BG071792 VERSION BG071792.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 809) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071792.1. Other_ESTs: H3103B05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3103 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..809 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3103B05-3" /db_xref="taxon:10090" /clone="H3103B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 198 c 159 g 254 t ORIGIN 1 aggtcccaat tttttttact caatttttaa atttcaaaat catatacatc agtctaaatc 61 atatagcaag ggattctgaa aactgaatgc acaatgagtc gtgtggtctc taataatctg 121 cacactacca tcctgcatat tcgtctcttt tatagtgtca aagtcaggta tgttttgaac 181 cacagttttg ttcagtaatg aagatgggtg atctccattt attttttccc ccttgcttat 241 tactggctct cttatatttt ccttttcctc agtcgagtag gtagtactac tttctcttat 301 aaactcagga tccatttttg cctctggttg cagcggtttt ccagacagta cgtgaggaac 361 ctcaggacag ccgtgttgca ggtccacagc tgaaccatgc gtgtttattt ttagtgcttc 421 gactgctgca gctgaatcag aagcagctgg agaggtggcg gactggtcag cggcttctgc 481 ttcactcaga ggacagcctt ctctgactcc ttttcccttt ccttgaagcc cagcaggatc 541 actacattcc tgcaactctg catggatctg aacctgctca tcggtggcct gaagaacctc 601 aatcagcggt ggggccagag accttgcctg cttcaatggg gagcaaagga cctcttcaag 661 aaacccatta acattttctt cattgataaa caatctttcc tccaaagact ccttgttcaa 721 gccacaatac cactctcgcc aaagtccgtg gctctctgga gattttgcca gtactatgac 781 tgcattattt aaagaaacgc tagtctcgg //