LOCUS BG071783 536 bp mRNA linear EST 12-MAY-2010
DEFINITION H3103C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3103C06 3', mRNA sequence.
ACCESSION BG071783
VERSION BG071783.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 536)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071783.1.
Other_ESTs: H3103C06-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3103 row: C column: 06
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..536
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3103C06-3"
/db_xref="taxon:10090"
/clone="H3103C06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 170 a 110 c 134 g 122 t
ORIGIN
1 gaaattcaat ttttattcca aatgtaatgt ctagaaatac aacagctaat actcaaaatg
61 atgtgctcaa ctggaaagca aaaaagctga tgtgtaggga gtggccagca ggctgccggc
121 ctcgaccctc tggttatgcc caagaaagca taaaaatgac cggtgctcct cttctaacct
181 ggaggtgggt gcagcagtta tagaaagcag gaaaagagag aacgccacat gatcccaagc
241 ttttgagatg aacagagtgg agaagacttt tggtagcaaa attttcacaa ttcttaaaat
301 gggagtcttt aaaagttctt caaatttaaa agtttaaaac aaaaacaaat gtggagaggg
361 gccagtcaca ctggtttaga agagctgacg cctgtcatga gattgacaat cagtccgact
421 tccagaaggg tgaggaccag tgtgcccgac caacgaaccc gaactgattg tgcaagagca
481 gggtggttcg gcatctcaag ccccatctat ggctcttcct ggctgaggcc gaggcg
//