LOCUS BG071779 869 bp mRNA linear EST 12-MAY-2010
DEFINITION H3103B03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3103B03 3', mRNA sequence.
ACCESSION BG071779
VERSION BG071779.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 869)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071779.1.
Other_ESTs: H3103B03-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3103 row: B column: 03
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..869
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3103B03-3"
/db_xref="taxon:10090"
/clone="H3103B03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 203 a 231 c 163 g 272 t
ORIGIN
1 gttgcctaca atctttattg gagttataca aaaagaatcc ccaaaagtga aaaaatacat
61 tatgtacaaa accactttcc ctcaggagga aggttctgct cgcctcttaa catgcagtgc
121 ttttaattgt agctgcagac tccacggtcc cctctgctgt ttggctctca gcctgattct
181 cagcctcggc ctccatgttt tctgaaactt cctttccact ggagacagca tccccactgc
241 ctccattcac ctctggctct tgtttagctt tctttgcatc atccttccgg ggactctctt
301 cctctggttt cctcttcttt ctgacaagat gggaaatatc agtcacacaa tttgatgagg
361 aagcgccatc tgttggtttt ctactggcaa tcatggatac tgaggcacca gctccactag
421 gagtgaaacc ggaagtagag ctctccacca gagtagcttt cagtgccagt tcggctacat
481 tcccactccg ctgagattcc tttgcgtctt ctatcttctc tcgaatttca ggtagcagtt
541 ctttcagctc ctcaatttct ttctcatatt cagtaaacga tccttcggcc tccttcatct
601 gctcatggag tacagccatt ctcttttcaa tgacatcgat agatttgcca aactgtgcta
661 ctgcttcatc atactgagag ttgtaaccat aggccaaacc taattggtag tgagtctctg
721 caaggagacg atcgtgagct tccaaatatt gttcttgcag gcttaggcaa gcctgaaact
781 cctccacagc ttggatataa ttctcagatt caacactaac ttctccaagt ttaagatggg
841 cttgtgcagc ataaagctgg gcttctttt
//