LOCUS BG071762 885 bp mRNA linear EST 12-MAY-2010
DEFINITION H3102H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3102H09 3', mRNA sequence.
ACCESSION BG071762
VERSION BG071762.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 885)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071762.1.
Other_ESTs: H3102H09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3102 row: H column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..885
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3102H09-3"
/db_xref="taxon:10090"
/clone="H3102H09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 211 a 234 c 193 g 247 t
ORIGIN
1 ctgtgtcatt cctatatact tttattataa aaaataaata aggataattt caacatgttt
61 taaatttata cagtattttt aagaaaaaat aggcaaagaa atctattagt aatatattga
121 tttttaaagg tctcagctgt tccttcaagg tgatccagga gtcaaggcca cctgagtgta
181 ggctgtgtcc cacgtggcca cattatctca gatgcacaga gatagagggc agctgcaggg
241 gcaggagtct tgcacttgtg ccttctggaa cttttaggcc acacgtactg accagggtct
301 cactgactcc tactaaaatc cagctggagc attttgggac agaccctgaa atctcacaaa
361 agcaggattt aacacttcct ttccattatg taagcacgtc tcaccaagct gtgccacagg
421 ttacactgtg tcctccatgc acagctcagt gcacggcagg gtaaagaaac agcctctgcc
481 ttgggtctga gtcggcagca gctcctctgc tcagtcctca gactgcttcg ctccttcccg
541 tgccagtctg tcggcctctt cattgcccac aaatcctgag tgaccaggaa tgtgcatcca
601 ctggatgtcc atgccctgag tgagctcgtc cagctccatg aagtcctcct tgttgatcac
661 atctttccct gtacttgttc tccagccatt cttcttccag ccctgaaccc agttagttat
721 cccattgatg gtgaacatgc tgtctgtgta cagaaccagc ttgctgatgt tctgagcctt
781 ggcttgcatg atggccttgc aggaaggggt ggcctgggcc ccagtaaacg ccaattcctg
841 ctcgtgcccg cttccgtcca ttactggagc aacagccatc cgtgt
//