LOCUS BG071725 679 bp mRNA linear EST 12-MAY-2010 DEFINITION H3102E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3102E01 3', mRNA sequence. ACCESSION BG071725 VERSION BG071725.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 679) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071725.1. Other_ESTs: H3102E01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3102 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..679 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3102E01-3" /db_xref="taxon:10090" /clone="H3102E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 230 a 126 c 151 g 172 t ORIGIN 1 caacacacag gattgataac ataggcatat gggtggcatg aatcaattaa aaaactttac 61 tttttatgcc aggaggggaa aaacaataaa tacaaggtgc taaaataagc attaagaatt 121 tggttggtaa ggtgtgggaa ggctcccctg atactgatct gtctcagcaa accacacaca 181 cacataaacg gcacaaagta tgattgaggt ggtgagattt taaaaaacaa gacaacataa 241 ttcaggttaa ctgcactgaa cagtgaataa atgaaatcca tctacacctg aatgaacatg 301 tttaacaatc aaaaaatttt aaacaaccac aaaaagtaaa aacttccaac aaacacaaac 361 aggatttgtc taaagggcac acagtcgccc tgcagaggac cccgccttta ctggtgtgtc 421 ttctggtgag acaagagaca gagacaggct ggactggtta acagggcgac aggacagtca 481 tacagtggag cgctgtagct ggctaggccc cctgggttcc actgcagagc tggctttgtg 541 cgtaggaggc acatggataa gggtgagtca ggcagacatt attcaaaagc tactctgcca 601 gtaaccattg gataacgctg ggaaagcttt gggctttgta ttttattttt atttttaaat 661 tttatttttt taagtttta //