LOCUS BG071710 740 bp mRNA linear EST 12-MAY-2010 DEFINITION H3102C09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3102C09 3', mRNA sequence. ACCESSION BG071710 VERSION BG071710.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 740) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071710.1. Other_ESTs: H3102C09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3102 row: C column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..740 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3102C09-3" /db_xref="taxon:10090" /clone="H3102C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 217 a 176 c 166 g 181 t ORIGIN 1 ccagatttta aaagaaagac gaaatagatc ccttctgatt cctgacagag tgggtctcag 61 tgctttttaa aaacattaac cctgccttta tacgtcaact ttcaaataag cgccctcgct 121 ccctcacatt aaacatgatc tattccacca ggcaaacaaa gagaaataag atcagccctt 181 tctgtggtat cgagcttagg ctgtcaggaa ctccaggcct gtattagctg gatgtctcat 241 ctctgtgcac acagcctctg agagagcaac atgaatgggg gatttattta gtttctgttt 301 cagaggtgtg ttagcacatt gtgggggaag ggaggggaga gccatggtgg ggaggggaat 361 caggacacga agcagacggg gaatacaggg agtactgaga agaccagtac ttaccactct 421 tagtgaccac ttccagccat gatgccctac tcccagttgt gccattagac catgagtcca 481 acaactgaca cagtgcattc attcaatctc aggcctcatg ttgtcatcac ctccagaaac 541 catcatagac acaccctgag gacagtttta ttagccccct tggtgtctca cagtaagccc 601 caatgtccca gaaaacgttc aggacgatga ggacttgtaa acaattagct ctctcaggtg 661 cttatgctag aaccaaataa tgagttacct cagtgttcac aaaggaacgc acagatcgaa 721 agtagctcag caaggtaatt //