LOCUS BG071687 755 bp mRNA linear EST 12-MAY-2010
DEFINITION H3102A09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3102A09 3', mRNA sequence.
ACCESSION BG071687
VERSION BG071687.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 755)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071687.1.
Other_ESTs: H3102A09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3102 row: A column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..755
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3102A09-3"
/db_xref="taxon:10090"
/clone="H3102A09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 199 c 177 g 194 t
ORIGIN
1 ggatgatagc tgagttttta ttggcagtcc tagtaaaata tgtaacttct cattcattct
61 aagcaaggct tcccccacac acaccaccac agcttttctt caaataaccc ctgtactctt
121 ccattagaat aggagatttt gaatagcagg gttttgggtg ataagcagtc actttaaatc
181 ttgtattggc tatgtggagg agaaagaata tgggaggatg tcagagatgg tgagtgagag
241 agagagttca ttggacacac tggaagacag caagcatttc aaagctgctt tcggtatctc
301 acgaaggccc aaactgctac catggtgagg gcaaacactg gtagcagcac catagctaca
361 ggaactccac ttggctctcc ttcacctcga tgtactatag gtccattctg cactggtaac
421 ctgtgctgta ctctcaggga cacagcacat cccgcattac ggaagaggtc tacagcatct
481 tggtgcagca ggttcttcag atcttggcca tttaccgaga ggatcttatc accctcctgg
541 agccgcccat cctgggccgc agccccatcc tctttgatac ggctgacgta gatgccactg
601 tcgttggaga catactgttg atctgtccca ccgacgatgt tgaagcccag ccccgaaggt
661 cctctcgtca ggttgatctc ttcctccgtg actaaataat ccacccgtcc gttcatatct
721 gactgctctc cggccggaaa ccccgggtca gcggg
//