LOCUS BG071655 814 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101F07 3', mRNA sequence. ACCESSION BG071655 VERSION BG071655.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 814) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071655.1. Other_ESTs: H3101F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..814 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101F07-3" /db_xref="taxon:10090" /clone="H3101F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 275 a 157 c 136 g 246 t ORIGIN 1 agaagtataa aatttatttt ataccaccca caaagttcta tatagtcagg aatgatacaa 61 tttgcaatag ctttaaaaaa aaaacatgac aaagatttaa aatatatctt caattacagt 121 attcctttat ccttagttag aattttttaa aagaaaattt atgctttaaa caaatgagac 181 ataaggaaaa taagacaatt tccacaacta tttttacatt tatgtttcaa tcctagtaca 241 tttcaatgta ttttgctaca taaacatgaa atcatgtaca actgctgtgc accaaaattt 301 agcttaatta gatctttcaa gtaacatgca attccaactc acaggtattc aagtactgct 361 acgaagcgtc ccattctgtg cagaggactc aatattgatt aggtattgaa actatcatgg 421 gtataggatt ctctttccct ttaatgtcat gaagtgcttt aactattttc ctcataggtg 481 aagaactaaa ctggtttttg gaattttaac agcatttcca aagataaaag ccttcaatta 541 ctgagatgca acggtagaat tgtaaccatc aaaatgaaca gcgagcctct tccagggact 601 gctggggagg ccttcacata agagactgga aacggactca gccccactgt atgtggtgag 661 gaatgtgaat tgatgcctta ttcccaccac cgctaaccag cccgctgagt cctgtaaacc 721 aagtaatgcc acacatggtc atttacgtgc tagctcactc tatgagagaa aagggagtca 781 actgagactt catgctgatc tctctgccat ggat //