LOCUS BG071611 661 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101B05 3', mRNA sequence. ACCESSION BG071611 VERSION BG071611.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 661) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071611.1. Other_ESTs: H3101B05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..661 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101B05-3" /db_xref="taxon:10090" /clone="H3101B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 118 c 114 g 239 t ORIGIN 1 atgtgtcaaa ataatttaat tttccctgta catttctgtt cacatgagaa atccagatac 61 acatttataa tatttacctg tcatgaaaca ttcaagtgaa ttcagatggc aaagtagaat 121 tcaatcacta gtgaaatgtt taaaaatata tattaaacaa aaatgtcttt ataagataaa 181 aataatcttc cacaatgcaa tgaattgcag atcactgaaa ttttaactct agattatgtc 241 agttcagttt ttggttccag atctagagac agttaaaaaa aaaaaagagt taacagaatt 301 cctatctact tctacgcttc tctttcttgt tcctagttac actgtttaaa gatgctgtgg 361 ctgaaggtgc tcttgcatga ccagtagcct ttagatgatc aaacagttta ttccgggatg 421 gaaattcact gtggcaagtc gcacagctga tgaggacatc actcactggc tgtgcttcag 481 caggtgcttt gacagatttt ttcacatctt tggttttctt tcctttggat ttaggaacac 541 ttttagcttc gctttttgga tcctcacagg cttctgtggt ctctgtaata caggtatttt 601 cttggggcct attttctaat tctttggcat tgtcttcatt tgacttagtc ttttctggag 661 c //