LOCUS BG071288 563 bp mRNA linear EST 12-MAY-2010
DEFINITION H3097A11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3097A11 3', mRNA sequence.
ACCESSION BG071288
VERSION BG071288.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 563)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG071288.1.
Other_ESTs: H3097A11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3097 row: A column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..563
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3097A11-3"
/db_xref="taxon:10090"
/clone="H3097A11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 169 a 105 c 104 g 185 t
ORIGIN
1 aatatttgat ttttggtcta ctatttaatg cttttttttt ttaatgttaa cacaggtctt
61 gtgatggcta aagtgatggc tgaagttcaa attactgtgc ttaagagatc tataaaactg
121 aaatgattct aacctgtaag ccccacttgc ccaaggacag ataacttcta cgaatgctag
181 gggcaggtat tcatgtaaga cggtcgttct caacctttct aatgctgcag gcctttcaat
241 acagctcctc atattgtggt gactcccacc tataaaatta ttttcactgc tacttcataa
301 ctgtaatttt gttagttatg aatcataatg taaacatctg tgttttccaa tagtcttagg
361 caactgctgt gaaagattta ttaaacttcc cctcataggg gtcatgacca caggttgaga
421 accactgatg taagataaca agcctcaact gcacagaatg ctcttgctca tgtaggcagg
481 agattcatag cagaaagtat attaagatgt atatttgccc caactggatg aagataggaa
541 gtaagtccct gactaatata ttt
//