LOCUS BG071042 628 bp mRNA linear EST 12-MAY-2010 DEFINITION H3094A11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3094A11 3', mRNA sequence. ACCESSION BG071042 VERSION BG071042.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 628) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071042.1. Other_ESTs: H3094A11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3094 row: A column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..628 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3094A11-3" /db_xref="taxon:10090" /clone="H3094A11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 121 c 111 g 177 t ORIGIN 1 gaataataag tgtcccttta tttgctgatt ataatagcaa caaaaagtgt ttccttgagt 61 tgatgtcaga ggcggcttct tcccaaatgt taagtaaagc agtgtacaac atcagtatta 121 aaatgttaaa tttcacattg tctataccac tttgatcttc tgaacaattt aattgagcaa 181 aataaggtaa aagtttacat ttacttcatc tttaggaatg taaaggtcta attattcaaa 241 cagttttatt ataaaactaa actctgaagg tgtctacaga gttggctttt taaagtgttt 301 ctctttaagt cagtagtcta acaaggatta gaaaagacaa aactgtccag tgtctgacaa 361 agtagaaagg gtaaaacata aataaggctt taatttggca aaatacaata caacgccttc 421 tgttaacttc taacgagtaa tttcccaatt acttcactct gcaaaagaga agaaagtgat 481 ctatttagaa caaggtaaga gaagcaaccc acgagcacgc accccacaca cagttcacaa 541 gacccagcct ggcgcttcag tggcacccgg agcccctcat actgatggtg atcacacgag 601 aggacacctc aggactcaga agccttta //