LOCUS BG071021 747 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093H01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093H01 3', mRNA sequence. ACCESSION BG071021 VERSION BG071021.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 747) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071021.1. Other_ESTs: H3093H01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: H column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..747 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093H01-3" /db_xref="taxon:10090" /clone="H3093H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 255 a 127 c 111 g 254 t ORIGIN 1 gaggtgaaaa cattgcttta acttccttat taatcaaata cattccaaag gaaatcgtgt 61 aatatgtatg ttgaaagcac aggcaaatct taacacaata gcacaggaat cagtaatact 121 gaaaatgact cttccgacag gatgcttaac aaacttaaaa cttctgagtt attgaaccaa 181 aggattcctt tctaataact gtgtcaatag tgaaactggg tctgtcccag aaatactcta 241 gtgatttcat tgtaatactt tttactgttg ttgacagttt taaataaatc ttgatatact 301 taaaataact tttgaaagtg gaaaagtata caaagtttta gataaaaaga ttaacagatg 361 tgatttaaat aaaatttccc ctttcttttt ttatcaataa tctaatcatt acttttaagc 421 agatagactg aattttaaaa cccagtccca aaatgaaaat ttcagtttga aattttaatc 481 agtcctaact ggaaaggatt gctatgtatc tggacacctt ttacaagaag tttatgtatt 541 aaagcagagg ccggttccta tacctttatt caattgtata tcccattgag acaaatataa 601 aaaatagaag actgtcactt ttgcttttgc aattgtgata ttttttttcc tcactgcagt 661 cttctataac ttttacagag ttcatggtcc ctaatatctc cccaccctcc atttttccta 721 ggtggggaaa tggctgccat aggaaac //