LOCUS BG070971 683 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093C06 3', mRNA sequence. ACCESSION BG070971 VERSION BG070971.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 683) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070971.1. Other_ESTs: H3093C06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: C column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..683 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093C06-3" /db_xref="taxon:10090" /clone="H3093C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 187 a 145 c 200 g 151 t ORIGIN 1 aaattaccag atagctggtg aaagttacca aatataggaa atttgcctaa agtggtgctc 61 ggaaaatgta agcctcaagt tatgtagcag aaacgaatgg gtgaaaatta atgcagtaaa 121 tgtgagggga gacgctggag gaagcagaga ctaagagtgg tctgtatgac agggaggcag 181 aacggacaag gctcagagct tacaggtgtt gcagtgagca cccacctagg cagcagcctc 241 agctgaaatg gacgaatccg gccttcctgc aagtccagcg acttcaagtt gtcttcaaac 301 tcacctcctg tgaggtccag cttcacacag atgacaaagg gagactgggc agcttggaaa 361 tgcaggatgg ggacctttgg cttgggtctt tcctgtgagt cttcgtagca gtagaagccc 421 ttcctgatct tgttctcatc aacgtcacag aaggccacca cctgggggtg aacatgggcc 481 agcagttaga tggcagtggg ggctataaga taaaaatgtg atcagaataa tggccaacag 541 gataatgagg aacgggctct accttgtgcc ggctggctgc agtcaggctg cggtataact 601 tacgcccctg cttgcctgca ttccagatgg tgaaggactt ccagtgaggt aggacttgtt 661 cctctaggaa gtggacacgg tgc //