LOCUS BG070969 821 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093C04 3', mRNA sequence. ACCESSION BG070969 VERSION BG070969.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 821) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070969.1. Other_ESTs: H3093C04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..821 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093C04-3" /db_xref="taxon:10090" /clone="H3093C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 197 c 186 g 198 t ORIGIN 1 aaagttttgt gatacattta tttaaaatac tttagtccaa aaagtttact aaatagattt 61 ttccaatatt taaagaaaat ggtgccatga ggtggtggca cacgccttta atcccaggac 121 ttgggaggca gaggcaggtg gatttctgaa tttgaggcca gcctggtcta caaagtgagt 181 tccaggacag ccagggccat acagagaaac cctgtcttga aaaaacaaaa caagacaaaa 241 caaaacaaaa caaaaaaaag aaagaaagaa agaaagaaag aaagaaagga aatggtatct 301 gtaataacag aaagggtaat tgatcatctg tcatgccaac agcaagcaag gtcttcccag 361 tgcagcaaca acgttcagaa tggatacggt ggccttttca gaaagcatgc aagttacatc 421 aggttgcttc taagtcagta ggagaaaccc attcaccggg ctctgcccat ggagagacag 481 acacagcatg tctgtgtaaa ttgcaggcat gccagctctg acaggtcaca cttcaggcta 541 cctaatgttg ggttttattt ctttctcttc ctcctcctcg ctgtcgtcaa cctgctgtat 601 gaccagatcg gcagacccgt cctctacgat ctccacatag gatctattct cttcctcgct 661 caggtgccac cggcagtcct tgtctccatc ggccggggct gtgcggtgtt gctcagcctc 721 caggtcagca gggagacttt ccatgcccac atcagcaaga cgctcgttac atagtctgta 781 gcgcctggtt ccttcctgca ccacttgccc cgtgaggtca g //