LOCUS BG070939 681 bp mRNA linear EST 12-MAY-2010 DEFINITION H3092A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3092A01 3', mRNA sequence. ACCESSION BG070939 VERSION BG070939.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 681) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070939.1. Other_ESTs: H3092A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3092 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..681 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3092A01-3" /db_xref="taxon:10090" /clone="H3092A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 145 c 110 g 207 t ORIGIN 1 gtggctggcc tcattcatga accaatcaac tgtatatggt ctgtgtttat tcatccttac 61 aattaaatag gcagagaaga aaatattttg cttgggatga aacaagcttt tgatttttca 121 aaagtgatac tactacatgg gtataaaagc tggcaaactc aagtatccca taacttggtt 181 tcaaatccag acaatttaaa gacagctgga gaaataccta atgaatttga tccatccttt 241 ccccaaagca ttacatacaa ttaaaataca gtagtatttg tatgccaaac actacaaatc 301 ggaagatgtt tgggtaatgg gaagagaact cttcaacaac tattgtttgc agtttgcaga 361 ataggataat cttctctagg aagaaaaatg tcacatagca gcactctatt caccaggaat 421 gtgcagagct gacagcttcc tcatgtaaca ggaaaccaaa ccttctggct gctcacaaca 481 tcgctgagct tccctttaat cttcaggaag tgtctcttga actctaatcc atcaccctta 541 gaaagtcgga agtcaaccag tatcttctca tccatttcta ccaaatttat tttgaaaatc 601 aacttattgt ttcttctatc agttgttgat acagtaacct gattcataca actcttcttc 661 cactgatagc ccaacttctc g //