LOCUS BG070923 769 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091G07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091G07 3', mRNA sequence. ACCESSION BG070923 VERSION BG070923.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 769) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070923.1. Other_ESTs: H3091G07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: G column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..769 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091G07-3" /db_xref="taxon:10090" /clone="H3091G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 208 a 147 c 174 g 240 t ORIGIN 1 agtagcatgt taacaaactt tactatattg ataaaaataa tgaaacaaaa ctgtgcttta 61 agagagccag ggccgaggag atgctgtgta agactgagga ccctggttca atctccacta 121 gcctgtaaga tggatatgtt acaggaaaaa caacaagatg tatttaaaac gtcccaacgg 181 tcctcttcag gtgttagtat tctggtgatg taattttctt cacaatttcc tggacattag 241 atcaatttct ttgcaatgat gaaatacttt tacaatcaag acaagaaaag aaagctcttc 301 ccactcaggc agtatttacc ttgatcgttc cgagatccat gggatttttg acaacgtcat 361 agtagttgtg gagtcccaaa gcatcagcat ccacaggatt atagaagggc catgcatacg 421 gcaaatgttt cttggcaagc atttctttaa gaatctcgct gcagtgcttt aattgctccg 481 ttactttgac tgtttttaaa actttgtgtt gttgctgaga gtctggcaaa acgttcttta 541 ctgtattttc ttttactggc atgttcactg gctttgtttc tctaagtgtc ggaggagatt 601 cgctacttgc tttagctatg gaagtggtag gagttgttgt gtctgctcgc ctcttcacac 661 cctttgtaat ttggaccaga gactgcgagt cacagatcgg gggagcttct tgtgccatgt 721 ttaagggcga gagagagatg tcaggaagcc cagaaggaat ctcttgccg //