LOCUS BG070920 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091G04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091G04 3', mRNA sequence. ACCESSION BG070920 VERSION BG070920.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070920.1. Other_ESTs: H3091G04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: G column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091G04-3" /db_xref="taxon:10090" /clone="H3091G04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 270 a 112 c 94 g 202 t ORIGIN 1 aaaacccgaa gcattaaaat ttattaaatg atgcagtaac aacagattct ttatttacaa 61 tagcattatt taacatcaaa taagcaaata gcatcagcaa agcaatagta acttgcataa 121 atgtgtttaa aatttctctg tatatatcta cctttgcata aactgctcac actagaaata 181 caaacatcaa tgcagatgaa caaagtgatg ttcagagtca actctgtttt gaaaataaat 241 cacaacccga aacactgtaa gctttctcct gaagaaccat agttaatata ttgcttaatt 301 ttacccttgt ataatttttt catatacaca tatctcaaat gcaacttcat gaggaactgt 361 acaaataaaa cccacaaatg acaaaggaaa aagagaagac agttaaatgt ttgaagaaac 421 gagttgtcat cactgttcag taacatacgg gtaagcgatg acttacttat tcaaaaattt 481 tacacaattc actatacaaa tataatacat tggacagcta tgtaggaata tacaagactt 541 aaaaacagat ctaaggcatt atgctaggtt ttagcatttt gaggttcttg cacatagctt 601 ttacctgtag taaagaaact taaaagattt tgctttagtc tataaagaaa caccagggag 661 aaagttctaa ttaaaatc //