LOCUS BG070911 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091F07 3', mRNA sequence. ACCESSION BG070911 VERSION BG070911.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070911.1. Other_ESTs: H3091F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091F07-3" /db_xref="taxon:10090" /clone="H3091F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 248 a 126 c 90 g 203 t ORIGIN 1 ccaacaaagt aatttatttt ttcctgagag actaaattca gtacaatatt tgttttcata 61 acattcaaca tgttttatgt caaacttaac cactttgcat gcagtgactg tggtggggtg 121 ggctatctta tgtgactgcc ctcagtgtga ttcatttgac agttctaaag cttatcagtg 181 atcagagcgt ccctcctaca gtcactcctg cactcccaat cagtttcccc gcacatcatc 241 taaaggaaat ttatgtggtg tgattacact ctttttaata ccaggatttc taaagctaag 301 aaaaaaaaca ctaacatcaa aaacatcagt gtttctagtc aaggatattt caattaaatt 361 tcatcagtac attatattat agtttaactc atgctagaaa ctttaaaacc caagatcttc 421 tgagtcacat aataccaaca tttcatatta atggattatt caggttctaa tacaaagata 481 ctaagtgatg aaaacagaaa aagccaagct ttcaagtgct cttttaaaaa aaatacagaa 541 gcaaaaaaaa tgaacataac tacacaaaat atacactaac taattgagaa actaaactag 601 ttaaagatta acctaaaaat acattttaga acttcgtgat accctcattt aagacagcaa 661 actaagg //