LOCUS BG070900 579 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091E08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091E08 3', mRNA sequence. ACCESSION BG070900 VERSION BG070900.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 579) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070900.1. Other_ESTs: H3091E08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: E column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..579 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091E08-3" /db_xref="taxon:10090" /clone="H3091E08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 144 a 147 c 125 g 163 t ORIGIN 1 ccatggaaac ataactcatt ttaaacaata aaaatcagaa aagaattacc tgttgatcaa 61 atattcatct tttgtcttat gatgaaacac aggaatggga accccccaga ctctctgccg 121 ggatatgcac cagtacggcc gtctgtccag catgtccgtc atgctgttca gtgcggctcc 181 gggaatgaac ttcaccgtct tcaacgactc cttagctgca gccttgatgt ccgtgatatt 241 tacaaaccac tgcttgctgg ctcgaatcag cacgggtgtc ttagttctcc agtcacaggg 301 atagctgtgc acaatgttct cttctttcaa cacattcttg gtagcttgaa gcatctttat 361 aaccacatct gttccttctt taagtacagc cttgttctga agttcagggc ctgcggcatc 421 ggtgaacatt ccgccttcat ccactaaaca gtccataggg aggctgtgct gagatgctac 481 gctgtaatct tccataccgt gagctggggc tgtgtgaacc aaccctgttc ctttggccat 541 agtcacgtgg gtagcaggta aaagaggaga cactttatc //