LOCUS BG070869 750 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093B04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093B04 3', mRNA sequence. ACCESSION BG070869 VERSION BG070869.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 750) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070869.1. Other_ESTs: H3093B04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: B column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..750 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093B04-3" /db_xref="taxon:10090" /clone="H3093B04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 269 a 145 c 108 g 228 t ORIGIN 1 attgctcaca tgaccatttt taatcattat agtatagtct cttgggtact catgtctacc 61 tagaaccaca ttttgatcta tgtgaagtaa acaaagaaca atttgccaag ctcagacagc 121 caagataaaa tcaaggttta aatggcattt gtataattgt cctgatagat taaaaacgtt 181 aaacatgcaa atgttaataa ggtagattca gacaatttaa acgctactaa aagcaatcgt 241 taatactgtc tacaacttat aaaatccaat ctatcaatgg cattactggt gtataagaaa 301 caaccacaaa atattacaca tgataataaa ttaataagtt gtcaatggtt tcaacttttt 361 tcacttagta tatatttctc ttagtatata tttcacttag tgcataattt ctcccttcct 421 tttcctctgt ctaaaccctc ctttctccct ttaaaataca tggcctttct ttaagtgatt 481 ttacataaat gtatgtaagt aaaaatatat gtgcacacac agacacacat agacacagac 541 atacacaaga cccacaagta gacttctaaa tataacctga tcggtctgca tgttacccac 601 acataaccta ctggaactac aaaacactcc cccacctaag gttcaaggat cattgtggaa 661 gatggagctg aaagagtgta agagccagaa gatctggaag atggctggga gattttgtct 721 cctaggaaca tcagaattta taacaataaa //