LOCUS BG070769 809 bp mRNA linear EST 26-JAN-2001 DEFINITION H3090H12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3090H12 3', mRNA sequence. ACCESSION BG070769 VERSION BG070769.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 809) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3090H12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3090 row: H column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..809 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3090H12-3" /db_xref="taxon:10090" /clone="H3090H12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 176 c 200 g 204 t ORIGIN 1 gtgttttttg tacccgatca ggtatgtagg agaagtctca tataatcagc aataatacag 61 agatggcatc tgtgatgatc acacaggggt ggtaaagatc aataagaacc tttagccact 121 gaggagaggc tggggcgtca ccagaatcga aaggtgggat ggggttagca aaggccttag 181 ggagccttgt ccataaccag aaaaggaatt agggtcgcaa agaggccata gtgcggctgt 241 ttccacttgc gtgtgacctg tgtgactgag gcgacctcta tcattacctt cgctaacaag 301 gctcaaagaa acagatggca tcctcctgca tgctatgtag catgagcatg acatcagtga 361 tggcatggtt ccagagtaca aggatcccaa cactgtattt cagcatcttt ggccaaggtc 421 tgccttcttt gaatccgctt ctgctataga cagtctctca cagataaaag tacacacatt 481 ttaagaagag cctaagacct catttccatg gtaaatttga agatcaagtt tcagttctgg 541 gccctagtcc tgcttgctca ctgggtctac acgacctccc agaggaagct gtaaggtcaa 601 acacttgtta aagtatcatg agcgtcacaa gaggccatca aagagattcc cagcacagga 661 ggaccagcag agtcttcggc cttaaaatgg cctgagctaa ctgtgtgaag ggtcttgtgt 721 ttcatttacc accaacctca agggcatgtc tgtaccacat aaactttatg tgtagtctaa 781 atgttataca gacgcttgag gtgggaagg //