LOCUS BG070708 709 bp mRNA linear EST 12-MAY-2010 DEFINITION H3090C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3090C06 3', mRNA sequence. ACCESSION BG070708 VERSION BG070708.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 709) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070708.1. Other_ESTs: H3090C06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3090 row: C column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..709 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3090C06-3" /db_xref="taxon:10090" /clone="H3090C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 233 a 154 c 144 g 178 t ORIGIN 1 cgggtgagaa agctttattg aaacacacat gcatattaaa gtagaatatc aaagaacaag 61 tctgagcctg ggctctcagg tatgtttcca ttacaggatc aatccatatt gaagggaatc 121 tttgaaaaac attctatgca gtttacaccc ataatcttaa tcactttagc tgcctgcaat 181 ccagtgacct tacaggaatg tcaacttgca gctggatgtc actgacaggc atttcttctc 241 tgctccagac accttccaca tacacctttc tatagacaga ctgcttatga atgaaaagtt 301 cagttcggaa gaatgagtag caggaaatga aagcccacta gaacctcttt taagtctcaa 361 cacacactac tcccatgtta cacccaggtc aagtttagga aacaaccaaa gacaggaact 421 gaaagtatat tgggtgaaaa gttagaatgg ctggggaatt ccatccacat tttcatggca 481 tggtactagt acccaacctg ggggagcacg gtgtcatttt agacggtctt tggcccttgc 541 agatgaaaca gaggtataca gactatgttc tatgtagcag cacacccaga cacaaactta 601 gagaaagcga taatacatga gagtgaacat gcctcatctt ccatgaggga gataaggata 661 tctctgtcca acaagtgctg taacagttta aaacagagaa ctcagcaca //