LOCUS BG070676 648 bp mRNA linear EST 12-MAY-2010 DEFINITION H3089H08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3089H08 3', mRNA sequence. ACCESSION BG070676 VERSION BG070676.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 648) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070676.1. Other_ESTs: H3089H08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3089 row: H column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..648 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3089H08-3" /db_xref="taxon:10090" /clone="H3089H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 127 c 115 g 183 t ORIGIN 1 ctgcaaaaga attggggagc cattttaata tttacaagga acaaatcagc agaacaagat 61 gctatcagat aggctgtgta cagtagctgc agcttataaa acacaccagt agtctgtgcc 121 tggtgagcat aaagaggacc aaggacacag atggctttac acccgagtga gtacacagag 181 catcaacaaa ttagaggaca aaagaattca cattttctac attaaaaaat tacagatctc 241 acaaatgtct ttgaagacac cgaaaattca aagtcctttg aagggtgtga aagaagaaat 301 ctgaaatgta actctgaatg taaaaagttt tacttcacaa ggccaatttt cttggcttct 361 gtttcatata tcaataatct ccacattttg actataaaaa cttctgcttc ttcatctagt 421 accatggcaa catcatctaa aatgctctgt ggtgaactat gtgccataac cttagagcaa 481 acaaaatcaa ctaatgtagc ttcttcttca cctatgtatt cgatgatttt cttattgatc 541 catggccgga ttcttcgttc catcagtata gaatccacaa tagaccaatc caaaggataa 601 gcaaagagct caggtttggc tgtgggaatt ttctcaatga gactctta //