LOCUS BG070675 636 bp mRNA linear EST 12-MAY-2010 DEFINITION H3089H07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3089H07 3', mRNA sequence. ACCESSION BG070675 VERSION BG070675.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 636) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070675.1. Other_ESTs: H3089H07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3089 row: H column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..636 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3089H07-3" /db_xref="taxon:10090" /clone="H3089H07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 161 c 151 g 147 t ORIGIN 1 atgtggtaat aattaatata tttctatgga agctgtctca tgcctcataa gcgtctaaga 61 taagacccag gtcactatgg cctaacggca tcgctaacag aagaatggaa agttcaccag 121 tcttcagcgt gggtcccctc cgtcctccac gagatcagac gcaatgcctc tggcttgttg 181 gacccaaggc agctgaagaa accacctctt gaacaatgtt ctagagcatt cagttcccag 241 tctgtgtgtt cagttaaagt gatggtgaaa ggaccaccgg acaaaaggca gaacatccat 301 tatccagcag gccatccccc agcaatccca gagaacgtag ttatcatagc agagttaaca 361 aaggaatctg tctgcggttc gggttcttta gagccggccg tgaagaggtc agcaaccaac 421 gtaagagcag cgacgggcag agaaaagcgg aacaacgatg gacactggtt catctgtttt 481 ctgtgttagc cagagaaccc ccactgactt atctgaattt caggcgtgca catcttaggc 541 tctgtggatc cctcacagac tcagagtggc tccctgcagc tctataacca cgtgagaaag 601 ctttctttat ctagcttggt ggcagccaac acagac //