LOCUS BG070572 677 bp mRNA linear EST 12-MAY-2010
DEFINITION H3088G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3088G09 3', mRNA sequence.
ACCESSION BG070572
VERSION BG070572.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 677)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070572.1.
Other_ESTs: H3088G09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3088 row: G column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..677
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3088G09-3"
/db_xref="taxon:10090"
/clone="H3088G09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 200 a 128 c 133 g 216 t
ORIGIN
1 gaaagttcac aggtagtaga acaaatgtcc acatccatat aaatgaaaaa gaacaagaaa
61 ttctagctag aattatattc agtgtacatt aacttttgtt ttgtttgttt gtttttgaga
121 cagggtttct ctgtgtagcc ctggctgtcc tggaactcac tttgtagacc aggctagcct
181 ccaactcaga aatccacctg cctctgcctc ctgagtgctg ggattaaagg tgtgtgccac
241 cactgctcag tgtacattaa cattttacac tataaaatca actggtacat tcctaattga
301 atacatactt gaaggtattt aagttgtgtc taactgagtt tagttgcatg tgatgtcagc
361 tgtaatttaa aagtaagagt agggacaaca aaaaaggttc agtgggtaaa ggtattgcct
421 tagccaagcc tgacagcctg agttcaatcg cttggaccca agttgtagaa gaagagtatc
481 atttcctcaa agttgtcttc aggcctccac atattcaccc atgtacataa ttttttaaaa
541 gattgtgtgg agctctttga gtaacagcaa atttagttct tttgaatctt tctagattag
601 gttactaaag agcttcccag agtactttgt tctaccaaga tgaaagtgtt ggttgagaac
661 ctttccaacc accattt
//