LOCUS BG070499 721 bp mRNA linear EST 12-MAY-2010 DEFINITION H3088A05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3088A05 3', mRNA sequence. ACCESSION BG070499 VERSION BG070499.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 721) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070499.1. Other_ESTs: H3088A05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3088 row: A column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..721 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3088A05-3" /db_xref="taxon:10090" /clone="H3088A05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 116 c 95 g 290 t ORIGIN 1 ggctcaactt ttaatttaca tatagaataa taagtgttca tggctttttt ttttttccaa 61 ggttctgctt gcaagatatt tttgtttttt ctcccctctt aaaataaaac taaaaagtta 121 aaacaagata aagctattct ttaaaaaaag ttacaacata cagctttggc ttatataaat 181 aattcagcag aatgtgttca aaagtagtgg atataatttt atatatagtc atcaattcat 241 taagggtgtt ttctttctta taaaatatac atgacctaaa atcagtttct ttaattttta 301 aagatatgaa tgtaaaagaa acttctgaca tattccaatt ataacttaat atattaattt 361 tattttgtta atgctctata tttctaggct agtatttctg aatatttcat gcgtgttttc 421 tattctctct ttttaatagc taaaaatcac ttctttgacc caatacattt tttttgcacg 481 tgcaaaacag ttatgtgtgg ggctttttgt ttattgtttg tttgtttaat atcaacagcc 541 ctttcccatg cacccctttg caatagaccc atgccaagtt gggttattaa tataaatgac 601 attttatgta cagtattgct ttcttggttc ctgcttttct actgctctgt tctacaaagc 661 attttgtttt ctgaagtaac tacagtcacc gcacagttaa ataaaccaaa tagggggccc 721 c //