LOCUS BG070473 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087G02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087G02 3', mRNA sequence. ACCESSION BG070473 VERSION BG070473.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070473.1. Other_ESTs: H3087G02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: G column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087G02-3" /db_xref="taxon:10090" /clone="H3087G02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 192 a 161 c 178 g 202 t ORIGIN 1 cattttgtaa agattttatt ttattttatg tgtatgggag ttgtgccggc atttctatct 61 gtgcaccatg tgtcaattcc cttggaactg taggtacaga caatcccatg tgggtgatgg 121 gaattgaacc agctcctctg agagagttgt cagcactctt caccactgag ccatctctct 181 agccccaaat aatggaagtg tgtggatagt ggggtgcctg aactctcctg agtaacttca 241 ggcaacttga gcacacatta ccgtgaaata tcttcatcag cagtgagctc ctgctccatc 301 agtaagaaca cctgcacaag ttctgtgatc atggtaggcc agagtgaggt gaggtgttgt 361 ggagacattc ttaaaagtaa cactctgaaa aacaggaaca cttgagagtg aagggtcggc 421 acctggggca aacggagact ctcaaccaat ctctcttgta tgtctggaag gtacttttgg 481 tactggtcac tttcactgct aagaacggcg aaggccagtc ttttgagaag catggctcgc 541 tgttctagct ccacatcccg gtttgcaaaa agattgagag aactgctctg ggccacggct 601 actcgagtca tcaaatctct gaaggttgtc ttatcatgtg tcatcaggtt gtccatgatt 661 gctctccagt gactaacaca ggaagcatcc atctgaaaga agctgggatc cataaaaagg 721 tcaaaggctt ctt //