LOCUS BG070404 826 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087A03 3', mRNA sequence. ACCESSION BG070404 VERSION BG070404.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 826) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070404.1. Other_ESTs: H3087A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..826 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087A03-3" /db_xref="taxon:10090" /clone="H3087A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 187 c 186 g 233 t ORIGIN 1 gaggtttgat gaagtaagac gtttattaga acctctttca gtttgaacta gattatacct 61 ttggaaataa cacattttac tctacaagca agcaaaaggg actctaagat tacttccttt 121 tatgtagatt gctttcaggt cagcttgctt aaggcatctt ctgcagagga tgtcttcaga 181 ctggccttca cggatgggcc ctgtgctgga ctagcactct ccactgtcca caaaagcact 241 ccttgattcc tgcatccacg agctggacgt gattaccaca gactgctaga gtagactaca 301 gaggacaagc cgccccggga actggagaca gcactcacct aggcagctgt gcctatacac 361 agtggggcct gactaggtct gctaaagagt agaaggactt tttccaaaat gaaaagatga 421 ccattttctt aaagaccaga attttaaagc ctttttaaaa aatctttgta gacccaagtt 481 caatgaactt cagattagca tctataattc agttgagtgt tcaggactgc agaagtcatc 541 ttgagtcttt ctacgaaagt atgtacatat cttcctcatg gagctgggag taatggtgac 601 cgggcctggt gacgtcttcc cactttgtct cctggaactg ggtgtctgag atgatggact 661 tcttggggat gaattttctg ccttgcgttt ggctgctatg gccaacaacc agttcttatt 721 ctctggagag ctattctctt tgcccaccat ctcagatcct tctccacaag gtctcaaagg 781 aagaggcagt ggtccacagc cttcagaagc ataaggactg acagga //