LOCUS BG070274 647 bp mRNA linear EST 12-MAY-2010
DEFINITION H3085E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3085E11 3', mRNA sequence.
ACCESSION BG070274
VERSION BG070274.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 647)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070274.1.
Other_ESTs: H3085E11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3085 row: E column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..647
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3085E11-3"
/db_xref="taxon:10090"
/clone="H3085E11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 195 a 158 c 125 g 169 t
ORIGIN
1 ggtttttcga gacagggttt ctctgtatag ccctggctgt cctgggactc actttgtaga
61 ccaggctggc ctcaaactca gaaatcctcc tgcctctgcc tcccgagtgc tggcattaaa
121 ggcgtgcgcc accacgcccg gtgctcagat tcccattaaa gatcttgtat ctttctcaac
181 ccaaatataa acagtagaca tttcacctcc tccaatattt ctttattata acctctaagg
241 tccaggaatc tgaggcaata tttaagtatc gaaaaatatg taagaaaagc tccttaaaaa
301 acaaaaacaa aactctaccc agtgagttag gtacagggac agttctgcaa cgctcactcc
361 tttcagtgct ccctaaaggt aaagagcttt acacattcca aacaccctct tcaaagtcag
421 ccctatctca ctgacaccca ctggctatgt aaaccacatt tgcctgaaat gttaccactc
481 aatggatttt tccaaactaa gtatatctgt gacctataca agaacacctg tactgacagt
541 ttctggaatg tcattattta ataaagcaca ggacatttgg aacccaagaa gtctccattc
601 tggaagggaa gggaatgcat ggaggaggga gagagggtat agggaga
//