LOCUS BG070259 553 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085D07 3', mRNA sequence. ACCESSION BG070259 VERSION BG070259.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 553) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070259.1. Other_ESTs: H3085D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..553 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085D07-3" /db_xref="taxon:10090" /clone="H3085D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 189 a 120 c 92 g 152 t ORIGIN 1 attccttgca taagaaagct caatttatta actgatatag tttattctta tcttcaaaga 61 gttaaaagca ttgtgtctat atattatgat ccatgtagaa gtttgagctg aaacccatag 121 gcatgcaata aatttatatt tagaaatcca gccaaagtag aaaccctaga tcactcattc 181 acaatctcac tcatagaaaa accaaacata tcaaaccttt tataaacttc tctgttaaat 241 caattatgcc actctgtact cagatgaggt ctcaaagata ttaaatccag aagagcactg 301 gtataaatgg atcttctaac acagctgcta gaatcttggg ctcactaact cacaggataa 361 gtctgaggcg atagtagacc tgctttgcag atgaccaaaa gctgagatgc aaaggttcag 421 ccccttcgcc cctgtacttc ttagctatct ctgaggcctc cacgatgccc tctgtctatg 481 gagaagcaaa cttgccagca aataaaatat tgccagactc atcccagata aagaacagga 541 aaggacaatt ggc //